STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHB5Protocadherin beta 5. (794 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.571
UCKL1
Uridine-cytidine kinase 1 like 1.
    
 0.571
JUP
Junction plakoglobin.
    
 0.571
ENSPCAP00000013756
annotation not available
    
 0.571
MYO9B
Myosin IXB.
    
 0.555
MYO9A
Myosin IXA.
    
 0.555
LHFPL2
LHFPL tetraspan subfamily member 2.
    
  0.529
BNIP2
BCL2 interacting protein 2.
    
 0.496
NMRK1
Nicotinamide riboside kinase 1.
    
 0.496
NMRK2
Nicotinamide riboside kinase 2.
    
 0.496
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.