STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHB5Protocadherin beta 5. (794 aa)    
Predicted Functional Partners:
ENSPCAP00000005211
annotation not available
    
  0.518
FAT4
FAT atypical cadherin 4.
    
  0.511
CTNNA3
Catenin alpha 3.
    
 0.483
CTNNA2
Catenin alpha 2.
    
 0.483
ENSPCAP00000014575
annotation not available
    
 0.483
FANCL
FA complementation group L.
     
 0.472
JUP
Junction plakoglobin.
    
 0.450
CTNNB1
Catenin beta 1.
    
 0.442
UCKL1
Uridine-cytidine kinase 1 like 1.
    
 0.442
FAT1
FAT atypical cadherin 1.
    
  0.442
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.