Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHOC1Shortage in chiasmata 1. (1500 aa)    
Predicted Functional Partners:
MSH4
mutS homolog 4.
      
 0.686
RFLNA
Refilin A.
      
 0.674
MCMDC2
Minichromosome maintenance domain containing 2.
      
 0.656
REC8
REC8 meiotic recombination protein.
      
 0.582
ENSPCAP00000003471
annotation not available
      
 0.580
STAG3
Stromal antigen 3.
      
 0.580
RNF212B
Ring finger protein 212B.
      
 0.578
ASB15
Ankyrin repeat and SOCS box containing 15.
      
 0.572
ASB14
Ankyrin repeat and SOCS box containing 14.
      
 0.572
ENSPCAP00000004163
annotation not available
      
 0.570
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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