STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002656annotation not available (81 aa)    
Predicted Functional Partners:
NFYA
Nuclear transcription factor Y subunit alpha.
    
 0.971
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.971
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
    
 
 0.890
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 
 0.890
POLE
DNA polymerase epsilon, catalytic subunit.
    
 0.770
POLE2
DNA polymerase epsilon 2, accessory subunit.
     
 0.748
MYO18A
Myosin XVIIIA.
    
 
 0.725
GATA5
GATA binding protein 5.
    
 
 0.631
GATA2
GATA binding protein 2.
    
 
 0.631
ZGLP1
Zinc finger GATA like protein 1.
    
 
 0.631
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.