STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXXC4CXXC finger protein 4. (233 aa)    
Predicted Functional Partners:
DVL1
Dishevelled segment polarity protein 1.
    
 0.885
DVL3
Dishevelled segment polarity protein 3.
    
 0.836
CXXC5
CXXC finger protein 5.
     
0.714
ENSPCAP00000003739
annotation not available
   
 
 0.688
ARID4A
AT-rich interaction domain 4A.
   
 
 0.671
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 
 0.607
TTC6
Tetratricopeptide repeat domain 6.
   
 
 0.504
ENSPCAP00000000218
annotation not available
     
 0.454
PNP
Purine nucleoside phosphorylase.
     
 0.445
SERBP1
SERPINE1 mRNA binding protein 1.
      
 0.433
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.