STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002716annotation not available (777 aa)    
Predicted Functional Partners:
ENSPCAP00000007162
annotation not available
    
 0.992
ENSPCAP00000011047
annotation not available
    
 
 0.881
RPL18
Ribosomal protein L18.
   
   0.873
RPL4
Ribosomal protein L4.
    
   0.868
RPL30
Ribosomal protein L30.
    
   0.868
RPL22L1
Ribosomal protein L22 like 1.
    
   0.868
RPL35
Ribosomal protein L35.
    
   0.868
RPL19
Ribosomal protein L19.
    
   0.868
RPL27A
Ribosomal protein L27a.
   
   0.857
ENSPCAP00000002899
annotation not available
    
   0.855
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.