STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA6CSemaphorin 6C. (967 aa)    
Predicted Functional Partners:
PLXNA2
Plexin A2.
    
 0.785
PLXND1
Plexin D1.
    
 0.774
MST1R
Macrophage stimulating 1 receptor.
    
 0.767
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.767
PLXNC1
Plexin C1.
    
 0.755
NRP1
Neuropilin 1.
    
 0.746
PLXNA3
Plexin A3.
    
 0.714
ENSPCAP00000015334
annotation not available
    
 0.714
ENSPCAP00000016062
annotation not available
    
 0.714
PLXNB1
Plexin B1.
    
0.698
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.