Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRIA4Glutamate ionotropic receptor AMPA type subunit 4. (892 aa)    
Predicted Functional Partners:
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
   
 0.999
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.999
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.999
CACNG8
Calcium voltage-gated channel auxiliary subunit gamma 8.
   
 0.987
DLG4
Discs large MAGUK scaffold protein 4.
   
 0.987
CACNG4
Calcium voltage-gated channel auxiliary subunit gamma 4.
   
 0.983
PICK1
Protein interacting with PRKCA 1.
    
 0.977
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
 0.977
CACNG7
Calcium voltage-gated channel auxiliary subunit gamma 7.
    
 0.975
CACNG5
Calcium voltage-gated channel auxiliary subunit gamma 5.
    
 0.975
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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