Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002850annotation not available (155 aa)    
Predicted Functional Partners:
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
   0.883
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
   0.867
ENSPCAP00000004474
annotation not available
    
   0.804
ENSPCAP00000002742
annotation not available
      
 0.568
CCDC116
Coiled-coil domain containing 116.
      
 0.564
LRRC52
Leucine rich repeat containing 52.
      
 0.503
AKAP12
A-kinase anchoring protein 12.
      
 0.500
NDFIP2
Nedd4 family interacting protein 2.
    
   0.476
GLIPR2
GLI pathogenesis related 2.
      
 0.454
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
    
   0.422
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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