STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCNM1Sodium channel modifier 1. (229 aa)    
Predicted Functional Partners:
ARMC7
Armadillo repeat containing 7.
    
 
 0.907
SF3B3
Splicing factor 3b subunit 3.
    
   0.900
SF3B1
Splicing factor 3b subunit 1.
    
   0.894
RNF113A
Ring finger protein 113A.
   
   0.879
SF3B2
Splicing factor 3b subunit 2.
    
   0.875
PRPF8
pre-mRNA processing factor 8.
    
   0.875
CDC5L
Cell division cycle 5 like.
    
   0.875
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
    
 
 0.707
CWC27
CWC27 spliceosome associated cyclophilin.
   
   0.686
RBM48
RNA binding motif protein 48.
    
 
 0.686
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.