Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGXT2Alanine--glyoxylate aminotransferase 2. (514 aa)    
Predicted Functional Partners:
ENSPCAP00000000954
annotation not available
  
 0.989
UPB1
Beta-ureidopropionase 1.
  
 
 0.949
GLDC
Glycine decarboxylase.
  
 
 0.942
PCCA
propionyl-CoA carboxylase subunit alpha.
    
 0.938
GATM
Glycine amidinotransferase.
     
 0.935
DLD
Dihydrolipoamide dehydrogenase.
   
 
 0.934
ABAT
4-aminobutyrate aminotransferase.
   
 0.933
ALDH6A1
Aldehyde dehydrogenase 6 family member A1.
   
 
 0.931
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 0.931
HAO2
Hydroxyacid oxidase 2.
   
 
 0.929
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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