Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000002891annotation not available (1663 aa)    
Predicted Functional Partners:
ENSPCAP00000001274
annotation not available
 
  
 
 0.797
ITGB6
Integrin subunit beta 6.
    
 0.797
ENSPCAP00000015251
annotation not available
    
 0.640
TNN
Tenascin N.
    
  0.613
TNC
Tenascin C.
    
  0.613
TNR
Tenascin R.
    
  0.613
LGALS3
Galectin 3.
    
 
 0.586
MTRF1L
Mitochondrial translational release factor 1 like.
      
 0.572
ENSPCAP00000003206
annotation not available
      
 0.571
TNFAIP3
TNF alpha induced protein 3.
      
 0.564
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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