Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLAAPhospholipase A2 activating protein. (744 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.998
HDAC6
Histone deacetylase 6.
    
 0.985
UBXN1
UBX domain protein 1.
    
 
 0.979
UBXN7
UBX domain protein 7.
   
 
 0.965
UBXN6
UBX domain protein 6.
   
 
 0.962
FAAP100
FA core complex associated protein 100.
   
 
 0.954
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.951
YOD1
YOD1 deubiquitinase.
    
 
 0.950
SYVN1
Synoviolin 1.
     
 0.944
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
     
 0.943
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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