STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2BC18H2B clustered histone 18. (126 aa)    
Predicted Functional Partners:
ENSPCAP00000007162
annotation not available
    
 0.857
HDAC9
Histone deacetylase 9.
    
 0.828
HDAC10
Histone deacetylase 10.
    
 0.828
HDAC6
Histone deacetylase 6.
    
 0.828
HDAC1
Histone deacetylase 1.
    
 0.828
ENSPCAP00000007294
annotation not available
    
 0.828
HDAC2
Histone deacetylase 2.
    
 0.828
HDAC5
Histone deacetylase 5.
    
 0.828
HDAC3
Histone deacetylase 3.
    
 0.828
KDM6B
Lysine demethylase 6B.
    
 0.828
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.