Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRIPTCXXC repeat containing interactor of PDZ3 domain. (80 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4.
    
 
 0.979
ARMC7
Armadillo repeat containing 7.
    
 
 0.922
PHF5A
PHD finger protein 5A.
   
   0.896
SF3B3
Splicing factor 3b subunit 3.
    
   0.892
SF3B2
Splicing factor 3b subunit 2.
    
   0.892
PRPF8
pre-mRNA processing factor 8.
    
   0.892
SF3B1
Splicing factor 3b subunit 1.
    
   0.892
RNF113A
Ring finger protein 113A.
    
   0.892
DLG3
Discs large MAGUK scaffold protein 3.
    
 
 0.764
CWC15
CWC15 spliceosome associated protein homolog.
   
   0.751
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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