STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003086annotation not available (290 aa)    
Predicted Functional Partners:
BOP1
BOP1 ribosomal biogenesis factor.
   
 
 0.986
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.978
ENSPCAP00000010543
annotation not available
   
 
 0.972
ENSPCAP00000006857
annotation not available
   
    0.963
WDR36
WD repeat domain 36.
   
 
 0.960
DDX18
DEAD-box helicase 18.
   
 
 0.959
DDX56
DEAD-box helicase 56.
   
 
 0.957
MRTO4
MRT4 homolog, ribosome maturation factor.
   
  
 0.954
BYSL
Bystin like.
   
  
 0.953
PWP1
PWP1 homolog, endonuclein.
   
  
0.950
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.