Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LRRC69 | MYSM1 | ENSPCAP00000003103 | ENSPCAP00000012781 | Leucine rich repeat containing 69. | Myb like, SWIRM and MPN domains 1. | 0.640 |
LRRC69 | OTUB2 | ENSPCAP00000003103 | ENSPCAP00000002653 | Leucine rich repeat containing 69. | OTU deubiquitinase, ubiquitin aldehyde binding 2. | 0.435 |
LRRC69 | TRIP12 | ENSPCAP00000003103 | ENSPCAP00000010653 | Leucine rich repeat containing 69. | Thyroid hormone receptor interactor 12. | 0.608 |
LRRC69 | USP14 | ENSPCAP00000003103 | ENSPCAP00000004901 | Leucine rich repeat containing 69. | Ubiquitin specific peptidase 14. | 0.417 |
LRRC69 | YOD1 | ENSPCAP00000003103 | ENSPCAP00000011324 | Leucine rich repeat containing 69. | YOD1 deubiquitinase. | 0.483 |
MYSM1 | LRRC69 | ENSPCAP00000012781 | ENSPCAP00000003103 | Myb like, SWIRM and MPN domains 1. | Leucine rich repeat containing 69. | 0.640 |
MYSM1 | TRIP12 | ENSPCAP00000012781 | ENSPCAP00000010653 | Myb like, SWIRM and MPN domains 1. | Thyroid hormone receptor interactor 12. | 0.573 |
MYSM1 | USP14 | ENSPCAP00000012781 | ENSPCAP00000004901 | Myb like, SWIRM and MPN domains 1. | Ubiquitin specific peptidase 14. | 0.937 |
MYSM1 | YOD1 | ENSPCAP00000012781 | ENSPCAP00000011324 | Myb like, SWIRM and MPN domains 1. | YOD1 deubiquitinase. | 0.602 |
OTUB2 | LRRC69 | ENSPCAP00000002653 | ENSPCAP00000003103 | OTU deubiquitinase, ubiquitin aldehyde binding 2. | Leucine rich repeat containing 69. | 0.435 |
OTUB2 | TRIP12 | ENSPCAP00000002653 | ENSPCAP00000010653 | OTU deubiquitinase, ubiquitin aldehyde binding 2. | Thyroid hormone receptor interactor 12. | 0.581 |
TRIP12 | LRRC69 | ENSPCAP00000010653 | ENSPCAP00000003103 | Thyroid hormone receptor interactor 12. | Leucine rich repeat containing 69. | 0.608 |
TRIP12 | MYSM1 | ENSPCAP00000010653 | ENSPCAP00000012781 | Thyroid hormone receptor interactor 12. | Myb like, SWIRM and MPN domains 1. | 0.573 |
TRIP12 | OTUB2 | ENSPCAP00000010653 | ENSPCAP00000002653 | Thyroid hormone receptor interactor 12. | OTU deubiquitinase, ubiquitin aldehyde binding 2. | 0.581 |
TRIP12 | USP14 | ENSPCAP00000010653 | ENSPCAP00000004901 | Thyroid hormone receptor interactor 12. | Ubiquitin specific peptidase 14. | 0.608 |
USP14 | LRRC69 | ENSPCAP00000004901 | ENSPCAP00000003103 | Ubiquitin specific peptidase 14. | Leucine rich repeat containing 69. | 0.417 |
USP14 | MYSM1 | ENSPCAP00000004901 | ENSPCAP00000012781 | Ubiquitin specific peptidase 14. | Myb like, SWIRM and MPN domains 1. | 0.937 |
USP14 | TRIP12 | ENSPCAP00000004901 | ENSPCAP00000010653 | Ubiquitin specific peptidase 14. | Thyroid hormone receptor interactor 12. | 0.608 |
USP14 | YOD1 | ENSPCAP00000004901 | ENSPCAP00000011324 | Ubiquitin specific peptidase 14. | YOD1 deubiquitinase. | 0.530 |
YOD1 | LRRC69 | ENSPCAP00000011324 | ENSPCAP00000003103 | YOD1 deubiquitinase. | Leucine rich repeat containing 69. | 0.483 |
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