STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC65Coiled-coil domain containing 65. (434 aa)    
Predicted Functional Partners:
ENSPCAP00000013754
annotation not available
    
 
 0.803
DNAI1
Dynein axonemal intermediate chain 1.
   
  
 0.795
EFCAB6
EF-hand calcium binding domain 6.
   
   0.785
ARMC4
Armadillo repeat containing 4.
   
 
 0.766
DNALI1
Dynein axonemal light intermediate chain 1.
    
 
 0.763
ENSPCAP00000002621
annotation not available
   
 
 0.729
ARMC3
Armadillo repeat containing 3.
   
 
 0.722
CCDC83
Coiled-coil domain containing 83.
   
    0.712
ENSPCAP00000009513
annotation not available
   
 
 0.711
RSPH3
Radial spoke head 3.
   
 
 0.705
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.