STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLU7SLU7 homolog, splicing factor. (529 aa)    
Predicted Functional Partners:
ENSPCAP00000010100
annotation not available
   
 0.999
PPIL3
Peptidylprolyl isomerase like 3.
    
 0.997
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.997
CDC40
Cell division cycle 40.
   
 0.996
DHX38
DEAH-box helicase 38.
   
 0.996
FAM32A
Family with sequence similarity 32 member A.
   
 0.996
PRPF19
pre-mRNA processing factor 19.
    
 0.995
ENSPCAP00000001844
annotation not available
   
 0.993
XAB2
XPA binding protein 2.
   
 0.992
PRPF8
pre-mRNA processing factor 8.
    
 0.991
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.