RBM4 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

RBM4

RNA binding motif protein 4. (363 aa)

Predicted Functional Partners:

ESRP2

0.754

ENSPCAP00000006829

0.751

ENSPCAP00000007786

0.722

DAZAP1

0.710

NOP58

0.707

ENSPCAP00000001998

0.687

ENSPCAP00000013369

0.687

YTHDC2

0.663

NOL8

0.661

NCBP1

0.660

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAZAP1	NCBP1	ENSPCAP00000006099	ENSPCAP00000009324	DAZ associated protein 1.	Nuclear cap binding protein subunit 1.	0.659
DAZAP1	NOL8	ENSPCAP00000006099	ENSPCAP00000004256	DAZ associated protein 1.	Nucleolar protein 8.	0.611
DAZAP1	RBM4	ENSPCAP00000006099	ENSPCAP00000003151	DAZ associated protein 1.	RNA binding motif protein 4.	0.710
ENSPCAP00000001998	NCBP1	ENSPCAP00000001998	ENSPCAP00000009324	annotation not available	Nuclear cap binding protein subunit 1.	0.780
ENSPCAP00000001998	RBM4	ENSPCAP00000001998	ENSPCAP00000003151	annotation not available	RNA binding motif protein 4.	0.687
ENSPCAP00000006829	ENSPCAP00000007786	ENSPCAP00000006829	ENSPCAP00000007786	annotation not available	annotation not available	0.694
ENSPCAP00000006829	NCBP1	ENSPCAP00000006829	ENSPCAP00000009324	annotation not available	Nuclear cap binding protein subunit 1.	0.506
ENSPCAP00000006829	NOP58	ENSPCAP00000006829	ENSPCAP00000006474	annotation not available	NOP58 ribonucleoprotein.	0.846
ENSPCAP00000006829	RBM4	ENSPCAP00000006829	ENSPCAP00000003151	annotation not available	RNA binding motif protein 4.	0.751
ENSPCAP00000006829	YTHDC2	ENSPCAP00000006829	ENSPCAP00000007363	annotation not available	YTH domain containing 2.	0.644
ENSPCAP00000007786	ENSPCAP00000006829	ENSPCAP00000007786	ENSPCAP00000006829	annotation not available	annotation not available	0.694
ENSPCAP00000007786	RBM4	ENSPCAP00000007786	ENSPCAP00000003151	annotation not available	RNA binding motif protein 4.	0.722
ENSPCAP00000013369	NCBP1	ENSPCAP00000013369	ENSPCAP00000009324	annotation not available	Nuclear cap binding protein subunit 1.	0.780
ENSPCAP00000013369	RBM4	ENSPCAP00000013369	ENSPCAP00000003151	annotation not available	RNA binding motif protein 4.	0.687
ESRP2	RBM4	ENSPCAP00000004920	ENSPCAP00000003151	Epithelial splicing regulatory protein 2.	RNA binding motif protein 4.	0.754
NCBP1	DAZAP1	ENSPCAP00000009324	ENSPCAP00000006099	Nuclear cap binding protein subunit 1.	DAZ associated protein 1.	0.659
NCBP1	ENSPCAP00000001998	ENSPCAP00000009324	ENSPCAP00000001998	Nuclear cap binding protein subunit 1.	annotation not available	0.780
NCBP1	ENSPCAP00000006829	ENSPCAP00000009324	ENSPCAP00000006829	Nuclear cap binding protein subunit 1.	annotation not available	0.506
NCBP1	ENSPCAP00000013369	ENSPCAP00000009324	ENSPCAP00000013369	Nuclear cap binding protein subunit 1.	annotation not available	0.780
NCBP1	RBM4	ENSPCAP00000009324	ENSPCAP00000003151	Nuclear cap binding protein subunit 1.	RNA binding motif protein 4.	0.660