RBM4 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RBM4

RNA binding motif protein 4. (363 aa)

Predicted Functional Partners:

ENSPCAP00000014229

0.777

NCBP1

0.748

ENSPCAP00000010409

0.737

LSM10

0.736

NCBP2

0.733

ENSPCAP00000006829

0.721

SNRPD3

0.717

ENSPCAP00000003832

0.714

SF3B1

0.696

MYSM1

0.688

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000003832	ENSPCAP00000010409	ENSPCAP00000003832	ENSPCAP00000010409	annotation not available	annotation not available	0.873
ENSPCAP00000003832	LSM10	ENSPCAP00000003832	ENSPCAP00000002336	annotation not available	LSM10, U7 small nuclear RNA associated.	0.533
ENSPCAP00000003832	NCBP1	ENSPCAP00000003832	ENSPCAP00000009324	annotation not available	Nuclear cap binding protein subunit 1.	0.740
ENSPCAP00000003832	NCBP2	ENSPCAP00000003832	ENSPCAP00000002986	annotation not available	Nuclear cap binding protein subunit 2.	0.803
ENSPCAP00000003832	RBM4	ENSPCAP00000003832	ENSPCAP00000003151	annotation not available	RNA binding motif protein 4.	0.714
ENSPCAP00000003832	SF3B1	ENSPCAP00000003832	ENSPCAP00000008738	annotation not available	Splicing factor 3b subunit 1.	0.521
ENSPCAP00000003832	SNRPD3	ENSPCAP00000003832	ENSPCAP00000001909	annotation not available	Small nuclear ribonucleoprotein D3 polypeptide.	0.782
ENSPCAP00000006829	ENSPCAP00000010409	ENSPCAP00000006829	ENSPCAP00000010409	annotation not available	annotation not available	0.846
ENSPCAP00000006829	ENSPCAP00000014229	ENSPCAP00000006829	ENSPCAP00000014229	annotation not available	annotation not available	0.999
ENSPCAP00000006829	LSM10	ENSPCAP00000006829	ENSPCAP00000002336	annotation not available	LSM10, U7 small nuclear RNA associated.	0.771
ENSPCAP00000006829	MYSM1	ENSPCAP00000006829	ENSPCAP00000012781	annotation not available	Myb like, SWIRM and MPN domains 1.	0.757
ENSPCAP00000006829	NCBP1	ENSPCAP00000006829	ENSPCAP00000009324	annotation not available	Nuclear cap binding protein subunit 1.	0.531
ENSPCAP00000006829	NCBP2	ENSPCAP00000006829	ENSPCAP00000002986	annotation not available	Nuclear cap binding protein subunit 2.	0.707
ENSPCAP00000006829	RBM4	ENSPCAP00000006829	ENSPCAP00000003151	annotation not available	RNA binding motif protein 4.	0.721
ENSPCAP00000006829	SF3B1	ENSPCAP00000006829	ENSPCAP00000008738	annotation not available	Splicing factor 3b subunit 1.	0.630
ENSPCAP00000006829	SNRPD3	ENSPCAP00000006829	ENSPCAP00000001909	annotation not available	Small nuclear ribonucleoprotein D3 polypeptide.	0.823
ENSPCAP00000010409	ENSPCAP00000003832	ENSPCAP00000010409	ENSPCAP00000003832	annotation not available	annotation not available	0.873
ENSPCAP00000010409	ENSPCAP00000006829	ENSPCAP00000010409	ENSPCAP00000006829	annotation not available	annotation not available	0.846
ENSPCAP00000010409	ENSPCAP00000014229	ENSPCAP00000010409	ENSPCAP00000014229	annotation not available	annotation not available	0.420
ENSPCAP00000010409	LSM10	ENSPCAP00000010409	ENSPCAP00000002336	annotation not available	LSM10, U7 small nuclear RNA associated.	0.999