STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRNKL1Crooked neck pre-mRNA splicing factor 1. (804 aa)    
Predicted Functional Partners:
BUD31
BUD31 homolog.
    
 0.999
SNW1
SNW domain containing 1.
  
 0.999
ENSPCAP00000008890
annotation not available
   
 0.999
XAB2
XPA binding protein 2.
   
0.999
RBM22
RNA binding motif protein 22.
   
 0.999
AQR
Aquarius intron-binding spliceosomal factor.
    
 0.997
CDC5L
Cell division cycle 5 like.
   
 
 0.993
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.991
SLU7
SLU7 homolog, splicing factor.
   
 
 0.991
CDC40
Cell division cycle 40.
   
 
 0.991
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.