Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003199annotation not available (96 aa)    
Predicted Functional Partners:
LYZL4
Lysozyme like 4.
      
 0.856
ENDOD1
Endonuclease domain containing 1.
      
 0.773
SLFNL1
Schlafen like 1.
   
    0.699
ART3
ADP-ribosyltransferase 3.
      
 0.685
PKIB
cAMP-dependent protein kinase inhibitor beta.
      
 0.591
TRIT1
tRNA isopentenyltransferase 1.
      
 0.588
TPPP2
Tubulin polymerization promoting protein family member 2.
      
 0.579
RBP1
Retinol binding protein 1.
      
 0.547
TMCO5A
Transmembrane and coiled-coil domains 5A.
   
  
 0.499
PGAM2
Phosphoglycerate mutase 2.
      
 0.494
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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