STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF215Ring finger protein 215. (377 aa)    
Predicted Functional Partners:
RSPO1
R-spondin 1.
    
 0.802
RSPO2
R-spondin 2.
    
 0.730
UBC
Ubiquitin C.
    
  0.714
UBE2K
Ubiquitin conjugating enzyme E2 K.
    
 0.707
RSPO3
R-spondin 3.
    
  0.703
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.700
ENSPCAP00000014262
annotation not available
    
 0.700
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.677
BAG6
BCL2 associated athanogene 6.
    
 
 0.653
ENSPCAP00000003941
annotation not available
    
 0.619
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.