Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT5Synaptotagmin 5. (386 aa)    
Predicted Functional Partners:
SYT1
Synaptotagmin 1.
   
   0.816
SYT2
Synaptotagmin 2.
   
   0.816
SNAP25
Synaptosome associated protein 25.
   
 0.756
ENSPCAP00000005676
annotation not available
   
 0.744
STX1A
Syntaxin 1A.
   
 0.720
STX1B
Syntaxin 1B.
   
 0.720
ATP6V1C2
ATPase H+ transporting V1 subunit C2.
    
   0.711
VAMP1
Vesicle associated membrane protein 1.
   
 0.672
STX2
Syntaxin 2.
   
 0.663
STX4
Syntaxin 4.
   
 0.633
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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