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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRD7Tudor domain containing 7. (1079 aa)    
Predicted Functional Partners:
PIWIL2
Piwi like RNA-mediated gene silencing 2.
   
 0.876
PIWIL1
Piwi like RNA-mediated gene silencing 1.
   
 0.855
ALPK1
Alpha kinase 1.
   
    0.691
ENSPCAP00000014457
annotation not available
  
 0.677
CDK17
Cyclin dependent kinase 17.
    
 
 0.671
GABPB1
GA binding protein transcription factor subunit beta 1.
   
 0.662
HELZ2
Helicase with zinc finger 2.
  
 0.644
ENSPCAP00000001278
annotation not available
    
   0.614
APRT
Adenine phosphoribosyltransferase.
    
 0.613
AKAP1
A-kinase anchoring protein 1.
   
 0.611
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.