ENSPCAP00000003271 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-expression

Experiments

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[Homology]

Score

ENSPCAP00000003271

annotation not available (274 aa)

Predicted Functional Partners:

TBCC

0.873

TBCB

0.772

TBCA

0.771

DHX35

0.769

TIPRL

0.769

ENSPCAP00000003329

0.575

ENSPCAP00000004895

0.567

GNG5

0.565

PSMG4

0.564

MRGBP

0.564

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHX35	ENSPCAP00000003271	ENSPCAP00000002025	ENSPCAP00000003271	DEAH-box helicase 35.	annotation not available	0.769
DHX35	ENSPCAP00000003329	ENSPCAP00000002025	ENSPCAP00000003329	DEAH-box helicase 35.	annotation not available	0.580
ENSPCAP00000003271	DHX35	ENSPCAP00000003271	ENSPCAP00000002025	annotation not available	DEAH-box helicase 35.	0.769
ENSPCAP00000003271	ENSPCAP00000003329	ENSPCAP00000003271	ENSPCAP00000003329	annotation not available	annotation not available	0.575
ENSPCAP00000003271	ENSPCAP00000004895	ENSPCAP00000003271	ENSPCAP00000004895	annotation not available	annotation not available	0.567
ENSPCAP00000003271	GNG5	ENSPCAP00000003271	ENSPCAP00000014665	annotation not available	G protein subunit gamma 5.	0.565
ENSPCAP00000003271	MRGBP	ENSPCAP00000003271	ENSPCAP00000008849	annotation not available	MRG domain binding protein.	0.564
ENSPCAP00000003271	PSMG4	ENSPCAP00000003271	ENSPCAP00000007428	annotation not available	Proteasome assembly chaperone 4.	0.564
ENSPCAP00000003271	TBCA	ENSPCAP00000003271	ENSPCAP00000011024	annotation not available	Tubulin folding cofactor A.	0.771
ENSPCAP00000003271	TBCB	ENSPCAP00000003271	ENSPCAP00000003287	annotation not available	Tubulin folding cofactor B.	0.772
ENSPCAP00000003271	TBCC	ENSPCAP00000003271	ENSPCAP00000015908	annotation not available	Tubulin folding cofactor C.	0.873
ENSPCAP00000003271	TIPRL	ENSPCAP00000003271	ENSPCAP00000007675	annotation not available	TOR signaling pathway regulator.	0.769
ENSPCAP00000003329	DHX35	ENSPCAP00000003329	ENSPCAP00000002025	annotation not available	DEAH-box helicase 35.	0.580
ENSPCAP00000003329	ENSPCAP00000003271	ENSPCAP00000003329	ENSPCAP00000003271	annotation not available	annotation not available	0.575
ENSPCAP00000004895	ENSPCAP00000003271	ENSPCAP00000004895	ENSPCAP00000003271	annotation not available	annotation not available	0.567
ENSPCAP00000004895	MRGBP	ENSPCAP00000004895	ENSPCAP00000008849	annotation not available	MRG domain binding protein.	0.576
ENSPCAP00000004895	PSMG4	ENSPCAP00000004895	ENSPCAP00000007428	annotation not available	Proteasome assembly chaperone 4.	0.578
GNG5	ENSPCAP00000003271	ENSPCAP00000014665	ENSPCAP00000003271	G protein subunit gamma 5.	annotation not available	0.565
GNG5	MRGBP	ENSPCAP00000014665	ENSPCAP00000008849	G protein subunit gamma 5.	MRG domain binding protein.	0.486
MRGBP	ENSPCAP00000003271	ENSPCAP00000008849	ENSPCAP00000003271	MRG domain binding protein.	annotation not available	0.564