STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPSECSSep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase. (504 aa)    
Predicted Functional Partners:
PSTK
phosphoseryl-tRNA kinase.
     
 0.953
SEPHS1
Selenophosphate synthetase 1.
     
 0.953
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.893
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
    
 0.844
CYB5R4
Cytochrome b5 reductase 4.
   
 0.789
ENSPCAP00000015801
annotation not available
    
 0.721
ENSPCAP00000007837
annotation not available
     
 0.702
ABAT
4-aminobutyrate aminotransferase.
  
 0.686
AGXT2
Alanine--glyoxylate aminotransferase 2.
  
 0.686
ENSPCAP00000006379
annotation not available
  
 0.686
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.