STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCF11PCF11 cleavage and polyadenylation factor subunit. (1651 aa)    
Predicted Functional Partners:
CLP1
Cleavage and polyadenylation factor I subunit 1.
    
 0.999
ENSPCAP00000007547
annotation not available
    
 0.997
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.990
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 0.990
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
    
 0.989
SYMPK
Symplekin.
    
 0.988
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.988
ENSPCAP00000007952
annotation not available
    
 0.981
ENSPCAP00000006073
annotation not available
   
 
 0.969
CPSF4
Cleavage and polyadenylation specific factor 4.
    
 0.962
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.