STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMD3FERM domain containing 3. (597 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.757
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
    
 
 0.584
UBE3A
Ubiquitin protein ligase E3A.
    
 
 0.555
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.532
ENSPCAP00000009560
annotation not available
   
 0.532
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
   
 0.532
ENSPCAP00000010334
annotation not available
    
  0.516
TLE1
TLE family member 1, transcriptional corepressor.
      
 0.505
ENSPCAP00000003540
annotation not available
      
 0.499
SPTA1
Spectrin alpha, erythrocytic 1.
   
 0.483
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.