TNNT2 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

TNNT2

Troponin T2, cardiac type. (238 aa)

Predicted Functional Partners:

TNNI3

0.989

TNNC1

0.989

TNNI2

0.986

TNNI1

0.976

TNNC2

0.976

ENSPCAP00000006070

0.948

TPM3

0.948

TPM1

0.948

TPM2

0.948

ACTC1

0.907

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTC1	ENSPCAP00000006070	ENSPCAP00000003604	ENSPCAP00000006070	Actin alpha cardiac muscle 1.	annotation not available	0.907
ACTC1	TNNC1	ENSPCAP00000003604	ENSPCAP00000011077	Actin alpha cardiac muscle 1.	Troponin C1, slow skeletal and cardiac type.	0.729
ACTC1	TNNC2	ENSPCAP00000003604	ENSPCAP00000009458	Actin alpha cardiac muscle 1.	Troponin C2, fast skeletal type.	0.489
ACTC1	TNNI1	ENSPCAP00000003604	ENSPCAP00000003368	Actin alpha cardiac muscle 1.	Troponin I1, slow skeletal type.	0.769
ACTC1	TNNI2	ENSPCAP00000003604	ENSPCAP00000008853	Actin alpha cardiac muscle 1.	Troponin I2, fast skeletal type.	0.735
ACTC1	TNNI3	ENSPCAP00000003604	ENSPCAP00000003033	Actin alpha cardiac muscle 1.	Troponin I3, cardiac type.	0.925
ACTC1	TNNT2	ENSPCAP00000003604	ENSPCAP00000003285	Actin alpha cardiac muscle 1.	Troponin T2, cardiac type.	0.907
ACTC1	TPM1	ENSPCAP00000003604	ENSPCAP00000012427	Actin alpha cardiac muscle 1.	Tropomyosin 1.	0.907
ACTC1	TPM2	ENSPCAP00000003604	ENSPCAP00000012590	Actin alpha cardiac muscle 1.	Tropomyosin 2.	0.907
ACTC1	TPM3	ENSPCAP00000003604	ENSPCAP00000007290	Actin alpha cardiac muscle 1.	Tropomyosin 3.	0.907
ENSPCAP00000006070	ACTC1	ENSPCAP00000006070	ENSPCAP00000003604	annotation not available	Actin alpha cardiac muscle 1.	0.907
ENSPCAP00000006070	TNNC1	ENSPCAP00000006070	ENSPCAP00000011077	annotation not available	Troponin C1, slow skeletal and cardiac type.	0.638
ENSPCAP00000006070	TNNC2	ENSPCAP00000006070	ENSPCAP00000009458	annotation not available	Troponin C2, fast skeletal type.	0.704
ENSPCAP00000006070	TNNI1	ENSPCAP00000006070	ENSPCAP00000003368	annotation not available	Troponin I1, slow skeletal type.	0.919
ENSPCAP00000006070	TNNI2	ENSPCAP00000006070	ENSPCAP00000008853	annotation not available	Troponin I2, fast skeletal type.	0.860
ENSPCAP00000006070	TNNI3	ENSPCAP00000006070	ENSPCAP00000003033	annotation not available	Troponin I3, cardiac type.	0.953
ENSPCAP00000006070	TNNT2	ENSPCAP00000006070	ENSPCAP00000003285	annotation not available	Troponin T2, cardiac type.	0.948
TNNC1	ACTC1	ENSPCAP00000011077	ENSPCAP00000003604	Troponin C1, slow skeletal and cardiac type.	Actin alpha cardiac muscle 1.	0.729
TNNC1	ENSPCAP00000006070	ENSPCAP00000011077	ENSPCAP00000006070	Troponin C1, slow skeletal and cardiac type.	annotation not available	0.638
TNNC1	TNNC2	ENSPCAP00000011077	ENSPCAP00000009458	Troponin C1, slow skeletal and cardiac type.	Troponin C2, fast skeletal type.	0.941