close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBN1Fibrillin 1. (2865 aa)    
Predicted Functional Partners:
LUM
Lumican.
   
 0.954
COL1A2
Collagen type I alpha 2 chain.
   
 0.910
COL5A2
Collagen type V alpha 2 chain.
   
 0.901
COL3A1
Collagen type III alpha 1 chain.
   
 0.879
MFAP2
Microfibril associated protein 2.
   
 0.872
DCN
Decorin.
   
 0.871
ENSPCAP00000014868
annotation not available
   
 0.829
MFAP5
Microfibril associated protein 5.
   
 0.826
ELN
Elastin.
   
 0.805
TGFB1
Transforming growth factor beta 1.
    
 0.793
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.