Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBN1Fibrillin 1. (2865 aa)    
Predicted Functional Partners:
LUM
Lumican.
   
 0.969
ELN
Elastin.
   
 0.966
COL5A2
Collagen type V alpha 2 chain.
   
 0.939
COL3A1
Collagen type III alpha 1 chain.
   
 0.936
COL1A2
Collagen type I alpha 2 chain.
   
 0.929
DCN
Decorin.
   
 0.912
FURIN
Furin, paired basic amino acid cleaving enzyme.
   
 0.906
FBN3
Fibrillin 3.
   
 0.896
FBN2
Fibrillin 2.
   
 0.896
MFAP2
Microfibril associated protein 2.
   
 0.893
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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