close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1CBProtein phosphatase 1 catalytic subunit beta. (286 aa)    
Predicted Functional Partners:
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
  
 0.988
PPP1R12C
Protein phosphatase 1 regulatory subunit 12C.
  
 0.985
WDR82
WD repeat domain 82.
    
 0.982
ITSN2
Intersectin 2.
    
 0.981
ENSPCAP00000006073
annotation not available
    
 0.972
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.969
ENSPCAP00000015704
annotation not available
    
 0.969
PPP1R12B
Protein phosphatase 1 regulatory subunit 12B.
  
 0.968
WDR33
WD repeat domain 33.
    
 0.966
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.966
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.