Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1CBProtein phosphatase 1 catalytic subunit beta. (286 aa)    
Predicted Functional Partners:
WDR82
WD repeat domain 82.
   
 0.997
TOX4
TOX high mobility group box family member 4.
   
 0.996
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
   
 0.993
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
   
 0.993
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
  
 0.992
PPP1R12B
Protein phosphatase 1 regulatory subunit 12B.
  
 0.992
PPP1R13L
Protein phosphatase 1 regulatory subunit 13 like.
    
 0.991
PPP1R10
Protein phosphatase 1 regulatory subunit 10.
    
 0.989
PPP1R12C
Protein phosphatase 1 regulatory subunit 12C.
  
 0.988
SHOC2
SHOC2 leucine rich repeat scaffold protein.
   
 0.988
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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