Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHIPPleckstrin homology domain interacting protein. (1787 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.974
CUL4B
Cullin 4B.
   
 0.920
CUL4A
Cullin 4A.
   
 0.920
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.876
NIPBL
NIPBL cohesin loading factor.
   
  
 0.849
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.827
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
   
  0.822
BUB3
BUB3 mitotic checkpoint protein.
   
 0.820
ATAD2B
ATPase family AAA domain containing 2B.
   
 0.805
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
   
    0.803
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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