STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIT1Nitrilase 1. (329 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
    
 0.738
BCAT2
Branched chain amino acid transaminase 2.
  
 0.695
BCAT1
Branched chain amino acid transaminase 1.
  
 0.695
SRM
Spermidine synthase.
  
 
 0.693
SMS
Spermine synthase.
  
 
 0.693
NUDT15
Nudix hydrolase 15.
    
 0.693
ENSPCAP00000001005
annotation not available
    
 0.672
ENSPCAP00000006681
annotation not available
    
 0.671
OPLAH
5-oxoprolinase, ATP-hydrolysing.
    
 0.669
NT5E
5'-nucleotidase ecto.
    
  0.660
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.