Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMED8Transmembrane p24 trafficking protein family member 8. (324 aa)    
Predicted Functional Partners:
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
  
 
 0.870
ALDH4A1
Aldehyde dehydrogenase 4 family member A1.
  
 
 0.765
ALDH5A1
Aldehyde dehydrogenase 5 family member A1.
  
 
 0.739
L3HYPDH
trans-L-3-hydroxyproline dehydratase.
    
 0.724
STX8
Syntaxin 8.
    
   0.714
ENSPCAP00000011946
annotation not available
   
 0.708
PRODH2
Proline dehydrogenase 2.
   
 0.708
TRAPPC5
Trafficking protein particle complex 5.
   
  
 0.700
COPB2
Coatomer protein complex subunit beta 2.
    
   0.691
AFAP1L2
Actin filament associated protein 1 like 2.
      
 0.664
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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