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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC4Armadillo repeat containing 4. (968 aa)    
Predicted Functional Partners:
TTC25
Tetratricopeptide repeat domain 25.
  
 
 
 0.881
ENSPCAP00000013571
annotation not available
   
 
 0.856
ENSPCAP00000014743
annotation not available
    
 
 0.854
EFCAB1
EF-hand calcium binding domain 1.
  
 
 0.849
WDR90
WD repeat domain 90.
    
   0.823
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.814
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.789
CCDC65
Coiled-coil domain containing 65.
   
 
 0.766
PACRG
Parkin coregulated.
   
 
 0.757
IQUB
IQ motif and ubiquitin domain containing.
  
 
 0.750
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.