Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003340annotation not available (1683 aa)    
Predicted Functional Partners:
RAB11A
RAB11A, member RAS oncogene family.
   
 0.902
RAB11B
RAB11B, member RAS oncogene family.
   
 0.902
ENSPCAP00000010175
annotation not available
   
 
  0.894
RAB11FIP2
RAB11 family interacting protein 2.
   
 0.890
EXOC4
Exocyst complex component 4.
   
 0.848
MYO5A
Myosin VA.
     
  0.841
MYL6
Myosin light chain 6.
    
 0.827
ARPC2
Actin related protein 2/3 complex subunit 2.
    
  0.824
RAB27B
RAB27B, member RAS oncogene family.
    
 0.816
RAB27A
RAB27A, member RAS oncogene family.
    
 0.816
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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