Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMTK2Lemur tyrosine kinase 2. (1487 aa)    
Predicted Functional Partners:
MYO6
Myosin VI.
    
 
 0.805
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 
 0.679
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
 
 0.679
MST1R
Macrophage stimulating 1 receptor.
    
 0.660
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.660
KITLG
KIT ligand.
    
 0.643
ENSPCAP00000012733
annotation not available
    
 0.606
IL34
Interleukin 34.
   
 0.599
PDGFB
Platelet derived growth factor subunit B.
    
 0.577
CSF1
Colony stimulating factor 1.
    
 0.559
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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