Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H1-2H1.2 linker histone, cluster member. (212 aa)    
Predicted Functional Partners:
CDK2
Cyclin dependent kinase 2.
   
 
 0.742
ENSPCAP00000009418
annotation not available
   
 
 0.723
CDK4
Cyclin dependent kinase 4.
   
 
 0.687
CCNE1
Cyclin E1.
    
   0.683
ENSPCAP00000002051
annotation not available
    
 0.653
HP1BP3
Heterochromatin protein 1 binding protein 3.
   
 0.620
ENSPCAP00000016064
annotation not available
   
 0.620
HMGB3
High mobility group box 3.
    
 0.610
CCNA2
Cyclin A2.
    
 
 0.605
ENSPCAP00000014601
annotation not available
   
 0.600
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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