Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003359annotation not available (833 aa)    
Predicted Functional Partners:
ENSPCAP00000000081
annotation not available
    
 0.749
SUMO1
Small ubiquitin like modifier 1.
    
 0.569
ENSPCAP00000003522
annotation not available
    
  0.527
STING1
Stimulator of interferon response cGAMP interactor 1.
    
  0.508
BIRC6
Baculoviral IAP repeat containing 6.
    
  0.499
UBD
Ubiquitin D.
    
 0.498
SIRT1
Sirtuin 1.
    
  0.495
ENSPCAP00000015075
annotation not available
   
 0.493
ENSPCAP00000010179
annotation not available
    
   0.486
ENSPCAP00000012454
annotation not available
    
   0.484
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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