Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNNI1Troponin I1, slow skeletal type. (187 aa)    
Predicted Functional Partners:
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.999
TNNC2
Troponin C2, fast skeletal type.
   
 0.995
TNNT2
Troponin T2, cardiac type.
  
 0.976
TNNT3
Troponin T3, fast skeletal type.
  
 0.975
ACTN2
Actinin alpha 2.
   
 0.973
TNNT1
Troponin T1, slow skeletal type.
   
 0.970
TNNI2
Troponin I2, fast skeletal type.
   
 
 0.957
TNNI3
Troponin I3, cardiac type.
   
 
  0.950
NXNL1
Nucleoredoxin like 1.
      
 0.943
SMIM20
Small integral membrane protein 20.
   
 0.941
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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