STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF9Membrane associated ring-CH-type finger 9. (346 aa)    
Predicted Functional Partners:
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 0.717
ENSPCAP00000002091
annotation not available
    
   0.705
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.702
RNF139
Ring finger protein 139.
    
 0.693
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 
 0.654
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.640
UBE2J2
Ubiquitin conjugating enzyme E2 J2.
    
 
 0.615
FAAP100
FA core complex associated protein 100.
    
 0.609
VCP
Valosin containing protein.
    
 0.603
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 0.603
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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