Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003375annotation not available (349 aa)    
Predicted Functional Partners:
CAV3
Caveolin 3.
   
 0.806
UBE2H
Ubiquitin conjugating enzyme E2 H.
    
 
 0.684
ENSPCAP00000014095
annotation not available
    
 0.663
TRIM44
Tripartite motif containing 44.
    
 0.591
NBAS
NBAS subunit of NRZ tethering complex.
    
 
 0.588
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
  0.575
TRIM37
Tripartite motif containing 37.
    
 0.574
HDAC6
Histone deacetylase 6.
    
 0.570
WDR53
WD repeat domain 53.
      
 0.567
ENSPCAP00000009332
annotation not available
    
 0.566
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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