close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCHCR1Coiled-coil alpha-helical rod protein 1. (865 aa)    
Predicted Functional Partners:
ENSPCAP00000004378
annotation not available
    
 
 0.603
ENSPCAP00000011462
annotation not available
    
 
 0.539
FAM187B
Family with sequence similarity 187 member B.
      
 0.524
SH3BP5
SH3 domain binding protein 5.
      
 0.524
KANSL2
KAT8 regulatory NSL complex subunit 2.
      
 0.523
SRM
Spermidine synthase.
   
  
 0.507
VARS1
valyl-tRNA synthetase 1.
      
 0.502
SKA1
Spindle and kinetochore associated complex subunit 1.
    
 
 0.493
ENSPCAP00000003430
annotation not available
   
 
 0.462
STAR
Steroidogenic acute regulatory protein.
    
 
 0.449
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.