Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003391annotation not available (582 aa)    
Predicted Functional Partners:
ABCG5
ATP binding cassette subfamily G member 5.
   
 0.859
ENSPCAP00000007865
annotation not available
     
 0.826
ABCC5
ATP binding cassette subfamily C member 5.
   
 0.758
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
   0.727
ABCD4
ATP binding cassette subfamily D member 4.
     
 0.714
ENSPCAP00000006258
annotation not available
   
 0.688
ENSPCAP00000000985
annotation not available
    
 
 0.682
ABCB10
ATP binding cassette subfamily B member 10.
  
 0.682
ABCB8
ATP binding cassette subfamily B member 8.
  
 0.678
ABCC12
ATP binding cassette subfamily C member 12.
   
 0.676
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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