Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCF19Transcription factor 19. (345 aa)    
Predicted Functional Partners:
RNF39
Ring finger protein 39.
     
 0.857
ENSPCAP00000009418
annotation not available
   
  
 0.783
CDCA8
Cell division cycle associated 8.
   
    0.765
MCM3
Minichromosome maintenance complex component 3.
   
    0.758
BIRC5
Baculoviral IAP repeat containing 5.
   
   0.745
ENSPCAP00000015728
annotation not available
   
   0.727
KIF20A
Kinesin family member 20A.
   
  
 0.726
KIF2C
Kinesin family member 2C.
   
    0.715
CDCA3
Cell division cycle associated 3.
   
    0.713
AURKB
Aurora kinase B.
   
  
 0.708
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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