STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003430annotation not available (226 aa)    
Predicted Functional Partners:
ENSPCAP00000014417
annotation not available
   
 0.970
SALL4
Spalt like transcription factor 4.
   
 0.948
SOX2
SRY-box transcription factor 2.
    
 0.914
SOX3
SRY-box transcription factor 3.
    
 0.914
CTNNB1
Catenin beta 1.
    
 0.859
SOX17
SRY-box transcription factor 17.
    
 0.851
SOX15
SRY-box transcription factor 15.
    
 0.848
SOX14
SRY-box transcription factor 14.
    
 0.823
SALL3
Spalt like transcription factor 3.
   
 0.801
SALL1
Spalt like transcription factor 1.
   
 0.801
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.