STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA46Spermatogenesis associated 46. (265 aa)    
Predicted Functional Partners:
MDM4
MDM4 regulator of p53.
    
   0.614
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
   0.609
SNX24
Sorting nexin 24.
    
   0.600
SSMEM1
Serine rich single-pass membrane protein 1.
      
 0.582
ENSPCAP00000007139
annotation not available
      
 0.557
TM9SF3
Transmembrane 9 superfamily member 3.
      
 0.501
HLCS
Holocarboxylase synthetase.
    
   0.483
ENSPCAP00000011295
annotation not available
    
   0.480
ENSPCAP00000014334
annotation not available
    
   0.480
MDM2
MDM2 proto-oncogene.
    
   0.471
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.