STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WHRNWhirlin. (901 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.955
GPSM2
G protein signaling modulator 2.
    
 
 0.927
ENSPCAP00000003491
annotation not available
    
 0.923
ENSPCAP00000003584
annotation not available
    
 0.923
MYO15A
Myosin XVA.
    
 0.923
ENSPCAP00000014106
annotation not available
    
 0.886
IFT172
Intraflagellar transport 172.
    
 0.874
IFT88
Intraflagellar transport 88.
    
 0.852
MYO7A
Myosin VIIA.
    
 0.851
MYO7B
Myosin VIIB.
    
 0.851
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.