Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM38BTransmembrane protein 38B. (289 aa)    
Predicted Functional Partners:
GOLIM4
Golgi integral membrane protein 4.
      
 0.880
SEMA6D
Semaphorin 6D.
      
 0.856
NGLY1
N-glycanase 1.
    
   0.754
FKBP10
FKBP prolyl isomerase 10.
      
 0.689
ENSPCAP00000014410
annotation not available
      
 0.668
SEC24D
SEC24 homolog D, COPII coat complex component.
      
 0.585
PPIB
Peptidylprolyl isomerase B.
      
 0.582
SLC25A16
Solute carrier family 25 member 16.
      
 0.578
SERPINF1
Serpin family F member 1.
      
 0.572
CREB3L1
cAMP responsive element binding protein 3 like 1.
      
 0.570
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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