Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000003454annotation not available (545 aa)    
Predicted Functional Partners:
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
  0.765
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 0.712
ENSPCAP00000012906
annotation not available
    
 0.665
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.665
PLA2G4A
Phospholipase A2 group IVA.
     
  0.610
ENSPCAP00000003479
annotation not available
    
  0.600
ENSPCAP00000014340
annotation not available
    
  0.600
NTNG1
Netrin G1.
    
 0.580
TYROBP
TYRO protein tyrosine kinase binding protein.
   
 0.562
ENSPCAP00000008039
annotation not available
    
  0.543
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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